Scarab Genomics has now launched the White Glove IS Detection Kit to
test for the presence of transposable Insertion Sequence (IS) elements
in a DNA of interest. Numerous IS elements are naturally present in the
genomes of E. coli strains commonly used for protein and plasmid
production, but are not present in the Scarab Genomics Clean Genome®
strains. IS element transposition is known to be stimulated by the cell
stress response and can lead to the “hopping” of IS elements into
plasmid DNA and or into other regions of the bacterial chromosome. The
transposition of IS elements into an expression vector can interfere
with the expression of a foreign protein in E. coli. IS element
transposition can also contaminate pDNA isolated for vaccine purposes.
To alleviate these undesired transposition events, Scarab Genomics
previously produced the Clean Genome® E. coli strains.
These strains are devoid of all known IS elements thereby creating the
ideal hosts for the production of foreign proteins or plasmid DNA. The
White Glove IS Detection Kit can be used to detect the presence of IS
elements in the genomes of commonly used E. coli strains. The kit
can also be used to determine which elements have transposed from these
genomes into a plasmid of interest propagated in these strains.