Schizophrenia risk conferred by rare damaging genetic variants is conserved across ethnicities

Reviewed by Emily Henderson, B.Sc.Mar 13 2023

Researchers have identified two previously unknown genes linked to schizophrenia and newly implicated a third gene as carrying risk for both schizophrenia and autism. Led by the Icahn School of Medicine at Mount Sinai, the multi-center study further demonstrated that the schizophrenia risk conferred by these rare damaging variants is conserved across ethnicities. The study may also point to new therapeutics.

The findings were published in the March 13 online issue of Nature Genetics https://www.nature.com/articles/s41588-023-01305-1 [DOI: 10.1038/s41588-023-01305-1].

Schizophrenia is among the most serious mental illnesses. It occurs in about 1 out of every 100 people, and affects how they think, feel, and behave. People with schizophrenia may seem as if they have lost touch with reality, which can be distressing for them and their families.

In the study-;the first known work of its kind to investigate schizophrenia risk across diverse populations, particularly those of African ancestry-;the investigators found the two risk genes, SRRM2 and AKAP11, by comparing the gene sequences of people with schizophrenia to those of healthy controls. The meta-analysis involved existing datasets totaling up to 35,828 cases and 107,877 controls.

The work builds upon a recent study that identified 10 risk genes for schizophrenia. However, unlike the current research, the earlier study was conducted in people of predominantly white European ancestry.

By focusing on a subset of genes, we discovered rare damaging variants that could potentially lead to new medicines for schizophrenia."

Dongjing Liu, PhD, lead author

Dongjing Liu, PhD is a former postdoctoral researcher in the laboratory of Alexander W. Charney, MD, PhD, a co-senior corresponding author of the study and Associate Professor of Psychiatry, Genetics and Genomic Sciences, Neuroscience, and Neurosurgery, at Icahn Mount Sinai.

"Also significant: studying people of various ancestral backgrounds, we found that rare damaging variants in evolutionarily constrained genes confer a similar magnitude of schizophrenia risk among those different populations and that genetic factors previously established in predominantly white people have now been extended to non-whites for this debilitating disease."

The third gene flagged in the study, PCLO, was previously implicated in schizophrenia but is now identified as having a shared risk for schizophrenia and autism. That finding raises a question about how we think about brain diseases as a whole, suggested Dr. Charney.

"It's been known that there are genetic components shared among illnesses. Clinically, genes could look different in the same family. The same variant in the same family may cause autism in one family member and schizophrenia in another. The idea of the same gene having different manifestations is very interesting to us, as it could be useful when it comes to treating people in the clinic."

The researchers caution that not every patient has a rare damaging variant in the identified schizophrenia genes. The disease is multifactorial and there is no single factor.

Next, the researchers plan to assess whether and how these genes may have a clinical role and may be tied to a specific behavior or symptom of schizophrenia. They will also work to identify drugs that might target the genes in the study.

"We wanted to continue the insightful work of my and Dr. Charney's deceased mentor, Pamela Sklar, MD, PhD, a psychiatrist, geneticist, and neuroscientist whose conceptualization of the study design to first select genes and then investigate them in a large number of cases and controls was a revolutionary idea," said Laura M. Huckins, PhD, co-senior corresponding author on the study, formerly with Icahn Mount Sinai and now an Associate Professor of Psychiatry at the Yale School of Medicine.

"This work wouldn't have been possible without the enormous global collaboration and how willing people were to work with us. Our ultimate shared goal in the field is to improve patients' lives, and we are grateful to our collaborators who partnered with us on this effort."